Assay (ProcessCore) | ProcessCore

ProcessCore

Assay Module

Namespace: ProcessCore.Helper
Assembly: ProcessCore.dll
Parent Module: Identifier

Assay only contains "FileName" in isa.assay.xlsx. To unify naming in our model, on read-in we transform fileName to identifier and reverse for writing.

Functions and values

Function or value	Description
`Assay.datamapFileNameFromIdentifier identifier` Full Usage: `Assay.datamapFileNameFromIdentifier identifier` Parameters: identifier : `string` - Any correct assay identifier Returns: `string`	On writing a xlsx file we unify our output to a relative path to ARC root. So: `assays/assayIdentifier/isa.datamap.xlsx`. identifier : `string` Any correct assay identifier Returns: `string`
`Assay.fileNameFromIdentifier identifier` Full Usage: `Assay.fileNameFromIdentifier identifier` Parameters: identifier : `string` - Any correct assay identifier Returns: `string`	On writing a xlsx file we unify our output to a relative path to ARC root. So: `assays/assayIdentifier/isa.assay.xlsx`. identifier : `string` Any correct assay identifier Returns: `string`
`Assay.identifierFromFileName fileName` Full Usage: `Assay.identifierFromFileName fileName` Parameters: fileName : `string` - FileName as written in isa.assay.xlsx metadata sheet Returns: `string`	On read-in the FileName can be any combination of "assays" (assay folder name), assayIdentifier and "isa.assay.xlsx" (the actual file name). This functions extracts assayIdentifier from any of these combinations and returns it. fileName : `string` FileName as written in isa.assay.xlsx metadata sheet Returns: `string`
`Assay.tryDatamapFileNameFromIdentifier identifier` Full Usage: `Assay.tryDatamapFileNameFromIdentifier identifier` Parameters: identifier : `string` - Any correct assay identifier Returns: `string option`	On writing a xlsx file we unify our output to a relative path to ARC root. So: `assays/assayIdentifier/isa.datamap.xlsx`. identifier : `string` Any correct assay identifier Returns: `string option`
`Assay.tryFileNameFromIdentifier identifier` Full Usage: `Assay.tryFileNameFromIdentifier identifier` Parameters: identifier : `string` - Any correct assay identifier Returns: `string option`	On writing a xlsx file we unify our output to a relative path to ARC root. So: `assays/assayIdentifier/isa.assay.xlsx`. identifier : `string` Any correct assay identifier Returns: `string option`
`Assay.tryIdentifierFromFileName fileName` Full Usage: `Assay.tryIdentifierFromFileName fileName` Parameters: fileName : `string` - FileName as written in isa.assay.xlsx metadata sheet Returns: `string option`	On read-in the FileName can be any combination of "assays" (assay folder name), assayIdentifier and "isa.assay.xlsx" (the actual file name). This functions extracts assayIdentifier from any of these combinations and returns it. fileName : `string` FileName as written in isa.assay.xlsx metadata sheet Returns: `string option`